convert_orthus_covariance: Convert orthus covariance matricies between representations

In jsilve24/mongrel: Bayesian Multinomial Logistic Normal Regression

Description

Convert orthus covariance matricies between representations

Usage

oilrvar2ilrvar(Sigma, s, V1, V2)

oilrvar2clrvar(Sigma, s, V)

oclrvar2ilrvar(Sigma, s, V)

oalrvar2clrvar(Sigma, s, d1)

oclrvar2alrvar(Sigma, s, d2)

oalrvar2alrvar(Sigma, s, d1, d2)

oalrvar2ilrvar(Sigma, s, d1, V2)

oilrvar2alrvar(Sigma, s, V1, d2)

Arguments

Sigma	covariance matrix arrat in specified transformed space (dim(Sigma)[3]=iter)
s	first s rows and colums of Sigma are transformed
V1	ILR contrast matrix of basis Sigma is already in
V2	ILR contrast matrix of basis Sigma is desired in
V	ILR contrast matrix (i.e., transformation matrix of ILR)
d1	alr reference element Sigma is already expressed with respec to
d2	alr reference element Sigma is to be expressed with respect to

Value

matrix

jsilve24/mongrel documentation built on Jan. 27, 2022, 9:54 p.m.