ridgePlot: Density plots showing gates for all files in a flowSet
In jtheorell/theFlowSpec: Tools for spectral unmixing of overdetermined flow-cytometry files. And other nice things.
Description
This function is completely analogous to the the densityplot function in
flowViz, but it takes the infor straight from the flowFrame, without the need
for any filter functions or objects, and the interface is simpler.
Usage
1
2
Arguments
focusSet
The flow set in focus.
plotVar
The variable that should be plotted.
filtVar
The variable where the filter is present.
sampleKey
The name on the keyword from which the names of the samples
can be extracted.
plotName
If a name different from plotVar should be used, it can be
added here.
saveResult
Should the result be saved as a file?
jtheorell/theFlowSpec documentation built on Aug. 22, 2019, 3:33 a.m.
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Description
This function is completely analogous to the the densityplot function in flowViz, but it takes the infor straight from the flowFrame, without the need for any filter functions or objects, and the interface is simpler.
Usage
1 2 |
Arguments
focusSet |
The flow set in focus. |
plotVar |
The variable that should be plotted. |
filtVar |
The variable where the filter is present. |
sampleKey |
The name on the keyword from which the names of the samples can be extracted. |
plotName |
If a name different from plotVar should be used, it can be added here. |
saveResult |
Should the result be saved as a file? |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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