bulk.normalize: Normalize the bulk sample using anchors

Description Usage Arguments Value Examples

View source: R/DECODER_function.R

Description

This function is used to normalize the bulk sample using anchors.

Usage

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bulk.normalize(bulk, variable.idx, anchor.idx, anchor.locus)

Arguments

bulk

bulk sample to be deconvolved

variable.idx

the index of highly variable loci

anchor.idx

the index of constant anchor loci

anchor.locus

the profile of constant anchor loci

Value

bulk.normalized

the anchor-based normalized bulk sample

Examples

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## Not run: 
bulk.normalized<-bulk.normalize(bulk,variable.idx,anchor.idx,anchor.locus)

## End(Not run)

jwyang16/DECODER documentation built on Nov. 4, 2019, 3:28 p.m.