generate_data_for_plot: generate_data_for_plot() Function

In jyoh1248/MyoSignature: Myocarditis signature proejct

generate_data_for_plot() Function

Description

This function generates data to plot distribution by Gene

Usage

generate_data_for_plot(
  datasetname,
  counts,
  samples_metadata,
  selected_group,
  selected.gene.table,
  genetype,
  master_gene_table
)

Arguments

datasetname	: added name for dataset
counts	: count matrix
samples_metadata	: Metadata of samples, need to involve "Chip", "BulkName" variable
selected_group	: selected group in Chip variable
selected.gene.table	: gene table composend of selected genes with ensembl and symbols variable
genetype	: type of gene names "ensembl" or "symbols"

Value

data ready to plot

Examples

generate_data_for_plot(datasetname, counts, samples_metadata, selected_group, selected.gene.table, genetype, master_gene_table)

jyoh1248/MyoSignature documentation built on May 18, 2022, 12:37 a.m.