plot_panel_gxp: Create the genotype x phenotype panel

In k-hench/GenomicOriginsScripts: Provides the R scripts for the paper "Ancestral variation, hybridization and modularity fuel a marine radiation"

Description

plot_panel_gxp plots the genotype x phenotype panel of a selected outlier window

Usage

plot_panel_gxp(lg, start, end, trait, ...)

Arguments

lg	string, linkage group (eg. "LG08")
start	numeric, start position of window (bp)
end	numeric, end position of window (bp)
trait	string, trait identifier for icon on gxp plot
...	catch-all parameter to allow excessive parameters through purrr::pmap

See Also

Other Figure 5: ax_scl(), cross_spec(), custom_annoplot(), dist_tibble(), distances_tree(), get_clr(), get_dist(), get_gxp_long(), get_isolated_topos(), get_neighbour_topos(), is_isolated(), min_dist(), no_title(), plot_curtain(), plot_fish_zoom(), plot_fst_poptree(), plot_leg(), plot_panel_anno(), plot_panel_delta_dxy(), plot_panel_dxy(), plot_panel_fst(), plot_panel_twisst(), prep_data(), theme_panels()

k-hench/GenomicOriginsScripts documentation built on July 24, 2021, 3:05 p.m.