baseTemperatureType: baseTemperatureType R6 class.

In kablag/RDML: Importing Real-Time Thermo Cycler (qPCR) Data from RDML Format Files

baseTemperatureType R6 class.

Description

Parent class for inner usage. Inherits: rdmlBaseType.

Format

An R6Class generator object.

Initialization

baseTemperatureType$new(duration,
  temperatureChange = NULL, durationChange = NULL, measure = NULL, ramp =
  NULL)

Fields

duration

checkCount. Duration of this step in seconds.

temperatureChange

checkNumber. Change of the temperature between two consecutive cycles: actual temperature = temperature + (temperatureChange * cycle counter)

durationChange

checkCount. Change of the duration between two consecutive cycles: actual duration = duration + (durationChange * cycle counter)

measure

measureType. Indicates to make a measurement and store it as meltcurve or real-time data.

ramp

checkNumber. Allowed temperature change between two consecutive cycles in degrees Celsius per second. If unstated, the maximal change rate is assumed.

Super class

RDML::rdmlBaseType -> baseTemperatureType

Methods

Public methods

• baseTemperatureType$new()

• baseTemperatureType$clone()

Inherited methods

• RDML::rdmlBaseType$.asXMLnodes()

• RDML::rdmlBaseType$copy()

• RDML::rdmlBaseType$print()

---

Method new()

Usage

baseTemperatureType$new(
  duration,
  temperatureChange = NULL,
  durationChange = NULL,
  measure = NULL,
  ramp = NULL
)

---

Method clone()

The objects of this class are cloneable with this method.

Usage

baseTemperatureType$clone(deep = FALSE)

Arguments

deep

Whether to make a deep clone.

kablag/RDML documentation built on Oct. 20, 2022, 5:47 a.m.