BSA1_OMSSA.idXML: Protein Peptide Mappings in IdXML File Format
In kairenchen721/interpretproteinidentification: Visually Interprets Protein Identification
Description
Format
Source
References
Description
A set of peptides obtained mass spectrometry, mapped to proteins from uniprot.
Format
idXML (see https://abibuilder.informatik.uni-tuebingen.de/archive/
openms/Documentation/nightly/html/classOpenMS_1_1IdXMLFile.html)
Source
https://github.com/OpenMS/OpenMS/blob/develop/share/OpenMS/examples/BSA/BSA1_OMSSA.idXML
References
Röst, H. L., Sachsenberg, T., Aiche, S., Bielow, C., Weisser, H.,
Aicheler, F., Andreotti, S., Ehrlich, H. C., Gutenbrunner, P., Kenar, E.,
Liang, X., Nahnsen, S., Nilse, L., Pfeuffer, J., Rosenberger, G.,
Rurik, M., Schmitt, U., Veit, J., Walzer, M., Wojnar, D., …
Kohlbacher, O. (2016). OpenMS: a flexible open-source software
platform for mass spectrometry data analysis. Nature methods, 13(9),
741–748. https://doi.org/10.1038/nmeth.3959
kairenchen721/interpretproteinidentification documentation built on Dec. 21, 2021, 5:15 a.m.
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Description Format Source References
Description
A set of peptides obtained mass spectrometry, mapped to proteins from uniprot.
Format
idXML (see https://abibuilder.informatik.uni-tuebingen.de/archive/ openms/Documentation/nightly/html/classOpenMS_1_1IdXMLFile.html)
Source
https://github.com/OpenMS/OpenMS/blob/develop/share/OpenMS/examples/BSA/BSA1_OMSSA.idXML
References
Röst, H. L., Sachsenberg, T., Aiche, S., Bielow, C., Weisser, H., Aicheler, F., Andreotti, S., Ehrlich, H. C., Gutenbrunner, P., Kenar, E., Liang, X., Nahnsen, S., Nilse, L., Pfeuffer, J., Rosenberger, G., Rurik, M., Schmitt, U., Veit, J., Walzer, M., Wojnar, D., … Kohlbacher, O. (2016). OpenMS: a flexible open-source software platform for mass spectrometry data analysis. Nature methods, 13(9), 741–748. https://doi.org/10.1038/nmeth.3959
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