test_data.osw: Protein Peptide Mappings in OSW File Format

In kairenchen721/interpretproteinidentification: Visually Interprets Protein Identification

Description

This is just a sample file, all of its components only have 1 protein, this means that all peptide map to one protein only. And thus the inferred proteins is simply just all the proteins. Also these protein are not real proteins (their "accession" does not correspond to an uniprot entry)

Format

transition PQP (see https://abibuilder.informatik.uni-tuebingen.de/ archive/openms/Documentation/release/2.6.0/html/ classOpenMS_1_1TransitionPQPFile.html) for file format description

Source

https://github.com/PyProphet/pyprophet/blob/master/tests/data/test_data.osw

References

Teleman, J., Röst, H. L., Rosenberger, G., Schmitt, U., Malmström, L., Malmström, J., & Levander, F. (2015). DIANA–algorithmic improvements for analysis of data-independent acquisition MS data. Bioinformatics (Oxford, England), 31(4), 555–562. https://doi.org/10.1093/bioinformatics/btu686

kairenchen721/interpretproteinidentification documentation built on Dec. 21, 2021, 5:15 a.m.