readSQLiteFile: Reads and Parses an SQLite Database File
In kairenchen721/interpretproteinidentification: Visually Interprets Protein Identification
Description
Usage
Arguments
References
Examples
View source: R/generateBipartiteGraph.R
Description
using RSQLite, it read an OSW file, which is database file that can be read
using with SQLite, this will return the mapping of protein to peptides
Usage
1
readSQLiteFile(OSWFilePath)
Arguments
OSWFilePath
the file path for the OSW file
References
R Special Interest Group on Databases (R-SIG-DB), Hadley Wickham
and Kirill Müller (2021). DBI: R Database Interface. R package version
1.1.1. https://CRAN.R-project.org/package=DBI
Kirill Müller, Hadley Wickham, David A. James and Seth Falcon (2021).
RSQLite: 'SQLite' Interface for R. R package version 2.2.8.
https://CRAN.R-project.org/package=RSQLite
Examples
1
2
dbPath <- system.file("extdata", "test_data.osw", package = "interpretproteinidentification")
readSQLiteFile(dbPath)
kairenchen721/interpretproteinidentification documentation built on Dec. 21, 2021, 5:15 a.m.
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Description Usage Arguments References Examples
View source: R/generateBipartiteGraph.R
Description
using RSQLite, it read an OSW file, which is database file that can be read using with SQLite, this will return the mapping of protein to peptides
Usage
1 | readSQLiteFile(OSWFilePath)
|
Arguments
OSWFilePath |
the file path for the OSW file |
References
R Special Interest Group on Databases (R-SIG-DB), Hadley Wickham and Kirill Müller (2021). DBI: R Database Interface. R package version 1.1.1. https://CRAN.R-project.org/package=DBI
Kirill Müller, Hadley Wickham, David A. James and Seth Falcon (2021). RSQLite: 'SQLite' Interface for R. R package version 2.2.8. https://CRAN.R-project.org/package=RSQLite
Examples
1 2 | dbPath <- system.file("extdata", "test_data.osw", package = "interpretproteinidentification")
readSQLiteFile(dbPath)
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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