backgroundPerSpecies: Generating background points for a species
In kaiyaprovost/subsppLabelR: Subspecies Labeled Occurences Generator

View source: R/CalculateNicheSubspeciesDifferences.R

backgroundPerSpecies

R Documentation

Generating background points for a species

Description

This function generates background points for each species.

Usage

backgroundPerSpecies(
  localities = loc_thin,
  verbose = T,
  name = "assigned",
  e = Env
)

Arguments

localities

Thinned cleaned localities.

Examples


loc_good_clean = cleanByEnvironment(Env, loc)
locs_thinned = spThinBySubspecies(loc_good_clean,thin.par=10,reps=1,lat.col="latitude",long.col="longitude",spec.col="assigned")
loc_thin_bgstuff = backgroundForPCA(localities=loc_good[,c("Longitude","Latitude")],r=200000,num=(100*nrow(localities)),e=Env)
perspecies_bgstuff = backgroundPerSpecies(loc_thin)

kaiyaprovost/subsppLabelR documentation built on March 17, 2024, 5:09 p.m.