mtm: Symbolic transition matrices for meiosis

In kbroman/ricalc: Calculations for Recombinant Inbred Lines

Symbolic transition matrices for meiosis

Description

Transition matrices for meiosis: the probabilities of the possible haplotypes for a meiotic product from a given parental type. These are symbolic versions.

Usage

data(mtm)

Format

A list of lists. Each list corresponds to a different condition (for example, 2 alleles for the X chromosome at 3 points). Each list contains a set of vectors, one for each possible parental type, containing a vector of character strings specifying the probabilities of each possible meiotic haplotype.

Source

These were formed using the internal functions write.meiosis.tm.symbolic and read.meiosis.tm.symbolic, using mathematica to simplify the expressions.

Examples

data(mtm)
sapply(mtm[["2A3"]],length)

kbroman/ricalc documentation built on May 17, 2023, 11:54 p.m.