Description Usage Arguments Details Value Examples
Group sequential design power using average hazard ratio under non-proportional hazards
1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 | gs_power_ahr(
enrollRates = tibble::tibble(Stratum = "All", duration = c(2, 2, 10), rate = c(3, 6,
9)),
failRates = tibble::tibble(Stratum = "All", duration = c(3, 100), failRate =
log(2)/c(9, 18), hr = c(0.9, 0.6), dropoutRate = rep(0.001, 2)),
ratio = 1,
events = c(30, 40, 50),
analysisTimes = NULL,
binding = FALSE,
upper = gs_b,
upar = gsDesign(k = length(events), test.type = 1, n.I = events, maxn.IPlan =
max(events), sfu = sfLDOF, sfupar = NULL)$upper$bound,
lower = gs_b,
lpar = c(qnorm(0.1), rep(-Inf, length(events) - 1)),
test_upper = TRUE,
test_lower = TRUE,
r = 18,
tol = 1e-06
)
|
enrollRates |
enrollment rates |
failRates |
failure and dropout rates |
ratio |
Experimental:Control randomization ratio (not yet implemented) |
events |
Targeted events at each analysis |
analysisTimes |
Minimum time of analysis |
binding |
indicator of whether futility bound is binding; default of FALSE is recommended |
upper |
Function to compute upper bound |
upar |
Parameter passed to |
lower |
Function to compute lower bound |
lpar |
Parameter passed to |
test_upper |
indicator of which analyses should include an upper (efficacy) bound; single value of TRUE (default) indicates all analyses;
otherwise, a logical vector of the same length as |
test_lower |
indicator of which analyses should include an lower bound; single value of TRUE (default) indicates all analyses;
single value FALSE indicated no lower bound; otherwise, a logical vector of the same length as |
r |
Integer, at least 2; default of 18 recommended by Jennison and Turnbull |
tol |
Tolerance parameter for boundary convergence (on Z-scale) |
Bound satisfy input upper bound specification in upper, upar
and lower bound specification in lower, lpar
.
The AHR()
function computes statistical information at targeted event times.
The tEvents()
function is used to get events and average HR at targeted analysisTimes
.
a tibble
with columns Analysis, Bound, Z, Probability, theta, Time, AHR, Events
.
Contains a row for each analysis and each bound.
1 2 3 4 5 6 7 8 9 10 | library(gsDesign2)
gs_power_ahr() %>% filter(abs(Z) < Inf)
# 2-sided symmetric O'Brien-Fleming spending bound
gs_power_ahr(analysisTimes = c(12, 24, 36),
binding = TRUE,
upper = gs_spending_bound,
upar = list(sf = gsDesign::sfLDOF, total_spend = 0.025, param = NULL, timing = NULL, theta=0),
lower = gs_spending_bound,
lpar = list(sf = gsDesign::sfLDOF, total_spend = 0.025, param = NULL, timing = NULL, theta=0))
|
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