isolationDistance-methods: Get the isolation distance of each cluster

In kevin-allen/relectro: Analysis of electrophysiological data

Description

For each cluster, the mahalanobis distance of all spikes relative to the cluster is calculated. The isolation distance is the minimal distance from the cluster center at which there are as many spikes from other cluster than from the cluster of interest. Distance is not defined for cases in which the number of cluster spikes is greater than the number of noise spikes.

Usage

isolationDistance(st, cg)

## S4 method for signature 'SpikeTrain'
isolationDistance(st, cg)

Arguments

st	SpikeTrain object
cg	CellGroup object

Details

From Schmitzer-Torbert et al. 2005

Value

a SpikeTrain object with the isolationDistance set.

kevin-allen/relectro documentation built on May 20, 2019, 9:06 a.m.