Files in kevin-allen/relectro
Analysis of electrophysiological data

.Rbuildignore
.gitignore
DESCRIPTION
NAMESPACE
R/CellGroup.R R/Clustering.R R/DatFiles.R R/ElectroProject.R R/HeadDirection.R R/JoinIntervals.R R/Math.R R/PlotsGeneric.R R/PlotsSpatial.R R/Positrack.R R/RecSession.R R/SignalProcessing.R R/SpatialProperties1d.R R/SpatialProperties2d.R R/SpikeExtraction.R R/SpikeTrain.R R/SpikeWaveform.R R/Ttl.R R/databaseDirectories.R
R/relectro.R
R/whdFromPositrack.R README.md
cleanup
configure
configure.ac
man/CellGroup-class.Rd man/DatFiles-class.Rd man/ElectroProject-class.Rd man/HeadDirection-class.Rd man/Positrack-class.Rd man/RecSession-class.Rd man/SpatialProperties1d-class.Rd man/SpatialProperties2d-class.Rd man/SpikeTrain-class.Rd man/SpikeWaveform-class.Rd man/animalNameFromSessionName.Rd man/autocorrelationDoughnut-methods.Rd man/autocorrelationDoughnutRotate-methods.Rd man/autocorrelationNoFields-methods.Rd man/bandPassFilter.Rd man/borderDetection-methods.Rd man/borderScore-methods.Rd man/boxplotTwoFactors.Rd man/brainRegionFromCluNo-methods.Rd man/centerOfMass.Rd man/checkIntegrityPositrackData.Rd man/checkIntegrityUp.Rd man/cluNoFromCluId.Rd man/clusterIsolationCheck.Rd man/colorScalePlot.Rd man/containsElectrodeLocation-methods.Rd man/containsEnvironment-methods.Rd man/containsStimulation-methods.Rd man/copyDatabase-methods.Rd man/copyRecSessionFiles-methods.Rd man/cor.diff.Rd man/createSpkFile.Rd man/crossRefractoryRatio-methods.Rd man/datFilesGetChannels-methods.Rd man/datFilesGetOneChannel-methods.Rd man/datFilesSamples-methods.Rd man/datFilesSet-methods.Rd man/deleteCluster.Rd man/detectDowns.Rd man/detectFiringFields-methods.Rd man/detectSpikesFromTrace.Rd man/detectSpikesTetrodes.Rd man/detectUps.Rd man/directionFilter-methods.Rd man/fileExists-methods.Rd man/firingRateHisto-methods.Rd man/firingRateMap2d-methods.Rd man/firingRateMapAutoPlot.Rd man/firingRateMapAutosPlot.Rd man/firingRateMapCenterOfMass-methods.Rd man/firingRateMapCorrelation-methods.Rd man/firingRateMapCorrelationRotation-methods.Rd man/firingRateMapPlot.Rd man/firingRateMapsPlot.Rd man/firingRateMapsRotation-methods.Rd man/getClusteredSessionList-methods.Rd man/getHistoStats-methods.Rd man/getHistoStatsShuffle-methods.Rd man/getIntervalsAtDirection-methods.Rd man/getIntervalsAtHeadDirection-methods.Rd man/getIntervalsAtSpeed-methods.Rd man/getIntervalsEnvironment-methods.Rd man/getIntervalsStimulation-methods.Rd man/getIsClustered-methods.Rd man/getIsEarlyProcessed-methods.Rd man/getMapStats-methods.Rd man/getMapStatsShuffle-methods.Rd man/getRecSession-methods.Rd man/getRecSessionObjects-methods.Rd man/getSessionList-methods.Rd man/getSessionListFromSessionNames-methods.Rd man/getSpeedAtResValues-methods.Rd man/getWaveformMatrix.Rd man/gridScore-methods.Rd man/gridSpacing-methods.Rd man/hdHistoAsDataFrame-methods.Rd man/headDirectionHisto-methods.Rd man/headDirectionPolarPlot.Rd man/headDirectionPolarPlots.Rd man/headDirectionStats-methods.Rd man/headDirectionStatsShuffle-methods.Rd man/histoStatsAsDataFrame-methods.Rd man/identifySpikeTimes.Rd man/ifr-methods.Rd man/ifrAssociation-methods.Rd man/isolationDistance-methods.Rd man/joinIntervalsAND.Rd man/linearRatePlot.Rd man/linearRatePlots.Rd man/linearizeLinearTrack-methods.Rd man/loadCellGroup-methods.Rd man/loadPositrack-methods.Rd man/loadRecSession-methods.Rd man/loadSessionsInList-methods.Rd man/loadSpikeTrain-methods.Rd man/makePairs.Rd man/mapSpatialAutocorrelation-methods.Rd man/mapsAsDataFrame-methods.Rd man/meanFiringRate-methods.Rd man/meanWaveform-methods.Rd man/mergeSimultaneousSpikes.Rd man/mergeTetrodeSpecificResCluFiles.Rd man/modeRelectro.Rd man/pathPlot.Rd man/percentileFiringRateMaps-methods.Rd man/plotPoints.Rd man/plotSimulatedRawTrace.Rd man/plotSpikeDetectionSegment.Rd man/powerRootMeanSquare.Rd man/rateHistoAsDataFrame-methods.Rd man/readFetFile.Rd man/recordingDate-methods.Rd man/refractoryRatio-methods.Rd man/runOnSessionList-methods.Rd man/sem.Rd man/sessionNameFromCluId.Rd man/sessionNamesFromSessionList.Rd man/setCellList-methods.Rd man/setEvents-methods.Rd man/setIntervals-methods.Rd man/setInvalidOutsideInterval-methods.Rd man/setPositrack-methods.Rd man/setSessionList-methods.Rd man/setSpikeTrain-methods.Rd man/shift.Rd man/shiftHdRandom-methods.Rd man/shiftLinRandom-methods.Rd man/shiftPositionRandom-methods.Rd man/shiftPositionVector.Rd man/shiftPositionVectors.Rd man/shiftSpeedRandom-methods.Rd man/simulateRawTrace.Rd man/smoothGaussian.Rd man/smoothhd-methods.Rd man/smoothxy-methods.Rd man/sortRecSessionListChronologically.Rd man/speedFilter-methods.Rd man/speedRateTuningCurve-methods.Rd man/speedScore-methods.Rd man/speedScoreShuffle-methods.Rd man/spikeDetectionAccuracy.Rd man/spikeDistanceMetric-methods.Rd man/spikeExtractionSession.Rd man/spikeExtractionTetrodeTrialByTrial.Rd man/spikeGeoFeatureOneSpike.Rd man/spikeGeoFeatures.Rd man/spikeOnPath-methods.Rd man/spikeOnPathPlot.Rd man/spikePCA.Rd man/spikeTimeAutocorrelation-methods.Rd man/spikeTimeAutocorrelationAsDataFrame-methods.Rd man/spikeTimeAutocorrelationCenterOfMass-methods.Rd man/spikeTimeAutocorrelationPlot.Rd man/spikeTimeAutocorrelationsPlot.Rd man/spikeTimeCrosscorrelation-methods.Rd man/spikeTimeCrosscorrelationAsDataFrame-methods.Rd man/spikeTimeCrosscorrelationEvents-methods.Rd man/spikeTimeCrosscorrelationEventsAsDataFrame-methods.Rd man/spikeTriggeredFiringRateMap2d-methods.Rd man/spikeTriggeredHeadDirectionCrossHisto-methods.Rd man/spikeTriggeredHeadDirectionHisto-methods.Rd man/spikeWaveformFromTraces.Rd man/statsAsDataFrame-methods.Rd man/timeWithinIntervals.Rd man/waveformCharacteristics-methods.Rd man/whdAlignedTtlPositrack.Rd man/whdFromPositrack.Rd man/writeFetFile.Rd man/writeMmFile.Rd man/writeParTetrodeFile.Rd
relectro.Rproj
src/Makevars
src/Makevars.in
src/autocorrelation.c
src/convolution.c
src/crosscorrelation.c
src/dat_files.c
src/firing_rate.c
src/ifr.c
src/intervals.c
src/math.c
src/relectro.h
src/signal_processing.c
src/spatial.c
src/spike_extraction.c
src/text_files.c
src/whdFiles.c
tests/testthat.R tests/testthat/test_DatFiles.R tests/testthat/test_ElectroProject.R tests/testthat/test_HeadDirection.R tests/testthat/test_JoinIntervals.R tests/testthat/test_Math.R tests/testthat/test_Positrack.R tests/testthat/test_RecSession.R tests/testthat/test_SpatialPlots.R tests/testthat/test_SpatialProperties2d.R tests/testthat/test_SpikeExtraction.R tests/testthat/test_SpikeTrain.R
tools/aclocal.m4
tools/compile
tools/install-sh
tools/missing
vignettes/relectro.Rmd
kevin-allen/relectro documentation built on May 28, 2018, 4:12 p.m.