speedScore-methods: Speed scores from spike train and positrack

In kevin-allen/relectro: Analysis of electrophysiological data

Description

Speed scores from spike train and positrack

Usage

speedScore(sp, st, pt, minSpeed, maxSpeed, angular = F, runLm = F)

## S4 method for signature 'SpatialProperties2d'
speedScore(sp, st, pt, minSpeed = 2,
  maxSpeed = 100, angular = F, runLm = F)

Arguments

sp	SpatialProperties2d object
st	SpikeTrain object with ifr
pt	Positrack object
minSpeed	Minimal speed to be considered
maxSpeed	Maximal speed to be considered
angular	Logical, if TRUE will use the angular velocity of the head instead of running speed
runLm	Logical, if TRUE a linear model will be build and slope and intercept calculated

Value

SpatialProperties2d object with the speed scores in the slots SpeedScore. If runLm argument was TRUE, then speedRateSlope and peedRateIntercept will also be filled The analysis only use period withing the intervals of the SpikeTrain object The function ifr() should be called prior to calling speedScore()

kevin-allen/relectro documentation built on May 20, 2019, 9:06 a.m.