spikeTriggeredFiringRateMap2d-methods: Calculate the spike-triggered firing rate maps of neurons...
In kevin-allen/relectro: Analysis of electrophysiological data
Description
Usage
Arguments
Details
Value
Description
Each spike is treated as a reference spike in turn. The map is constructed from the data
following the reference spikes by shifting the x and y coordinate so that the position of the
agent at the time of the reference spike is 0,0.
Usage
1
2
3
4
5
spikeTriggeredFiringRateMap2d(sp, st, pt, minIsiMs, maxIsiMs)
## S4 method for signature 'SpatialProperties2d'
spikeTriggeredFiringRateMap2d(sp, st, pt,
minIsiMs, maxIsiMs)
Arguments
sp
SpatialProperties1d object
st
SpikeTrain object
pt
Positrack object
minIsiMs
Minimal interspike interval to consider in ms
maxIsiMs
Maximal interspike interval to consider in ms
Details
The occupancy map and the firing rate maps are smoothed with a Gaussian kernel
The amount of smoothing is determined by slots smoothOccupancySd and smoothRateMapSd of sp
You can set the temporal limit for the data used to construct the map with minIsiMs and maxIsiMs
Value
SpatialProperties2d object with the spike-triggered firing rate maps
kevin-allen/relectro documentation built on May 20, 2019, 9:06 a.m.
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Description Usage Arguments Details Value
Description
Each spike is treated as a reference spike in turn. The map is constructed from the data following the reference spikes by shifting the x and y coordinate so that the position of the agent at the time of the reference spike is 0,0.
Usage
1 2 3 4 5 | spikeTriggeredFiringRateMap2d(sp, st, pt, minIsiMs, maxIsiMs)
## S4 method for signature 'SpatialProperties2d'
spikeTriggeredFiringRateMap2d(sp, st, pt,
minIsiMs, maxIsiMs)
|
Arguments
sp |
SpatialProperties1d object |
st |
SpikeTrain object |
pt |
Positrack object |
minIsiMs |
Minimal interspike interval to consider in ms |
maxIsiMs |
Maximal interspike interval to consider in ms |
Details
The occupancy map and the firing rate maps are smoothed with a Gaussian kernel The amount of smoothing is determined by slots smoothOccupancySd and smoothRateMapSd of sp
You can set the temporal limit for the data used to construct the map with minIsiMs and maxIsiMs
Value
SpatialProperties2d object with the spike-triggered firing rate maps
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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