speedRateTuningCurve-methods: Speed-rate tuning curve from spike train and positrack

In kevin-allen/relectro: Analysis of electrophysiological data

Description

Uses the ifr of cells to calculate the mean firing rate of neurons for different speed bands. You need to call ifr() on the st object first.

Usage

speedRateTuningCurve(sp, st, pt, minSpeed, maxSpeed, angular = FALSE,
  binSize = 5, maxBin = 30)

## S4 method for signature 'SpatialProperties2d'
speedRateTuningCurve(sp, st, pt, minSpeed = 2,
  maxSpeed = 100, angular = FALSE, binSize = 5, maxBin = 30)

Arguments

sp	SpatialProperties2d object
st	SpikeTrain object with ifr
pt	Positrack object
minSpeed	Minimal speed to be considered
maxSpeed	Maximal speed to be considered
angular	Logical, if TRUE then angular velocity is used instead of running speed
binSize	Size of the bins in the tuning curve
maxBin	Maximum speed in the tuning curve

Value

data.frame with the speed-rate tuning curves

kevin-allen/relectro documentation built on May 20, 2019, 9:06 a.m.