centroTelo_dist: Compute proximity with closest telomere and centromere

In kevinVervier/TiSAn:

Description

centroTelo_dist

Usage

centroTelo_dist(chr, position)

Arguments

chr	the chromosome number
position	the locus position

Value

telomere.bool: boolean value equal to TRUE if the position is inside a telomere region

telomere.prox: proximity value to the closest telomere

centromere.bool: boolean value equal to TRUE if the position is inside a centromere region

centromere.prox: proximity value to the closest centromere

Examples

#get centro/telo -mere related features for locus chr1:5000000
centroTelo_dist(chr=1,position=5000000)

kevinVervier/TiSAn documentation built on May 20, 2019, 9:07 a.m.