splitByGeneSet: Extracts Gene Subsets from a SummarizedExperiment object
In kevinrue/deeperTools: Downstream Processing of DeepTools Analyses
Description
Usage
Arguments
Value
Examples
View source: R/splitByGeneSet.R
Description
Extracts Gene Subsets from a SummarizedExperiment object
Usage
1
splitByGeneSet(se, genesets)
Arguments
se
A SummarizedExperiment object.
genesets
A list of gene sets.
Value
A list of SummarizedExperiment objects.
Examples
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# Prepare example data ----
sample_names <- c("A", "B")
se_list <- generateDeeptoolsExperiments(20, 10, sample_names)
se_list
# Usage ----
range_sets <- list(set1=c("GR_1"), set2=c("GR_2", "GR_3"))
splitByGeneSet(se_list[[1]], range_sets)
kevinrue/deeperTools documentation built on Feb. 28, 2020, 7:45 p.m.
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Description Usage Arguments Value Examples
View source: R/splitByGeneSet.R
Description
Extracts Gene Subsets from a SummarizedExperiment object
Usage
1 | splitByGeneSet(se, genesets)
|
Arguments
se |
A SummarizedExperiment object. |
genesets |
A list of gene sets. |
Value
A list of SummarizedExperiment objects.
Examples
1 2 3 4 5 6 7 8 9 10 11 | # Prepare example data ----
sample_names <- c("A", "B")
se_list <- generateDeeptoolsExperiments(20, 10, sample_names)
se_list
# Usage ----
range_sets <- list(set1=c("GR_1"), set2=c("GR_2", "GR_3"))
splitByGeneSet(se_list[[1]], range_sets)
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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