kharchenkolab/dropestr: Preprocessing of Droplet-Based Single-Cell RNA-Seq Data
Correction of UMI sequence errors, UMI collisions and filtration of low-quality cells using the methods described in "dropEst: pipeline for accurate estimation of molecular counts in droplet-based single-cell RNA-seq experiments", Petukhov et al., Genome Biology (2018), <doi:10.1186/s13059-018-1449-6>.
Getting started
Browse package contents
Package details |
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| Author | Viktor Petukhov [aut], Peter Kharchenko [aut], Evan Biederstedt [aut, cre] |
| Maintainer | Evan Biederstedt <evan.biederstedt@gmail.com> |
| License | GPL-3 |
| Version | 0.8.0 |
| URL | https://github.com/kharchenkolab/dropestr |
| Package repository | View on GitHub |
| Installation |
Install the latest version of this package by entering the following in R:
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