PlotCellsNumberHist: Plot for the estimation of minimal size of high-quality...

In kharchenkolab/dropestr: Preprocessing of Droplet-Based Single-Cell RNA-Seq Data

Description

Plot for the estimation of minimal size of high-quality cells.

Usage

PlotCellsNumberHist(
  umi.counts,
  breaks = 100,
  title = NULL,
  estimate.cells.number = FALSE,
  alpha = 0.6,
  show.legend = TRUE
)

Arguments

umi.counts	vector with the number of UMIs per cell
breaks	numeric Number of breaks in a histogram
title	title of the plot (default=NULL)
estimate.cells.number	boolean Whether to calculate cell numbers via EstimateCellsNumber() (default=FALSE)
alpha	numeric Value of the alpha parameter of the plot (default=0.6)

Value

Plot of ggplot type.

kharchenkolab/dropestr documentation built on Sept. 18, 2020, 2:14 a.m.