PrepareCellsNumberPlot: Prepare data for plotting the number of cells

In kharchenkolab/dropestr: Preprocessing of Droplet-Based Single-Cell RNA-Seq Data

Description

Prepare data for plotting the number of cells

Usage

PrepareCellsNumberPlot(
  umi.counts,
  breaks,
  estimate.cells.number = FALSE,
  title = NULL
)

Arguments

umi.counts	vector with the number of UMIs per cell
breaks	numeric Number of breaks in a histogram
estimate.cells.number	boolean Whether to calculate cell numbers via EstimateCellsNumber() (default=FALSE)
title	title of the plot (default=NULL)

Value

List with the data, needed for plotting:

plot.df	data frame with the data for plotting
title	title of th plot
umi.counts	transformed number of UMIs per cell
y.label	y label of the plot

kharchenkolab/dropestr documentation built on Sept. 18, 2020, 2:14 a.m.