compute_associations: Compute associations between donor proportions and factor...

In kharchenkolab/scITD: Single-Cell Interpretable Tensor Decomposition

Compute associations between donor proportions and factor scores

Description

Compute associations between donor proportions and factor scores

Usage

compute_associations(donor_balances, donor_scores, stat_type)

Arguments

donor_balances	matrx The balances computed from donor cell type proportions
donor_scores	data.frame The donor scores matrix from tucker results
stat_type	character Either "fstat" to get F-Statistics, "adj_rsq" to get adjusted R-squared values, or "adj_pval" to get adjusted pvalues.

Value

A numeric vector of association statistics (one for each factor)

kharchenkolab/scITD documentation built on Sept. 25, 2023, 11:02 p.m.