get_indv_subtype_associations: Compute subtype proportion-factor association p-values for...
In kharchenkolab/scITD: Single-Cell Interpretable Tensor Decomposition
View source: R/get_prop_associations.R
get_indv_subtype_associations R Documentation
Compute subtype proportion-factor association p-values for all subclusters of
a given major cell type
Description
Compute subtype proportion-factor association p-values for all subclusters of
a given major cell type
Usage
get_indv_subtype_associations(container, donor_props, factor_select)
Arguments
container
environment Project container that stores sub-containers
for each cell type as well as results and plots from all analyses
donor_props
matrix Donor proportions of subtypes
factor_select
numeric The factor to get associations for
Value
A vector of association statistics each cell subtype against a
selected factor.
kharchenkolab/scITD documentation built on Sept. 25, 2023, 11:02 p.m.
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View source: R/get_prop_associations.R
| get_indv_subtype_associations | R Documentation |
Compute subtype proportion-factor association p-values for all subclusters of a given major cell type
Description
Compute subtype proportion-factor association p-values for all subclusters of a given major cell type
Usage
get_indv_subtype_associations(container, donor_props, factor_select)
Arguments
container |
environment Project container that stores sub-containers for each cell type as well as results and plots from all analyses |
donor_props |
matrix Donor proportions of subtypes |
factor_select |
numeric The factor to get associations for |
Value
A vector of association statistics each cell subtype against a selected factor.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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