getPConsMtx: Get processed consensus matrix.
In khazum/ccImpute: ccImpute: an accurate and scalable consensus clustering based approach to
impute dropout events in the single-cell RNA-seq data
(https://doi.org/10.1186/s12859-022-04814-8)
getPConsMtx R Documentation
Get processed consensus matrix.
Description
This function gets consensus matrix based on the clustering solutions
contained in the kmResults input parameter and does the processing to
use it for imputation.
Usage
getPConsMtx(kmResults, consMin)
Arguments
kmResults
list of k-means clustering assignments on the PCA loadings
sub-datasets.
consMin
the low-pass filter threshold value for processed
consensus matrix.
Value
a processed consensus matrix.
khazum/ccImpute documentation built on Nov. 28, 2022, 7:27 a.m.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
| getPConsMtx | R Documentation |
Get processed consensus matrix.
Description
This function gets consensus matrix based on the clustering solutions
contained in the kmResults input parameter and does the processing to
use it for imputation.
Usage
getPConsMtx(kmResults, consMin)
Arguments
kmResults |
list of k-means clustering assignments on the PCA loadings sub-datasets. |
consMin |
the low-pass filter threshold value for processed consensus matrix. |
Value
a processed consensus matrix.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Embedding an R snippet on your website
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.