wCorDist: Computes a weighted Pearson distance measure matrix. If ranks...

In khazum/ccImpute: ccImpute: an accurate and scalable consensus clustering based approach to impute dropout events in the single-cell RNA-seq data (https://doi.org/10.1186/s12859-022-04814-8)

Computes a weighted Pearson distance measure matrix. If ranks are used this measure turns into weighted Spearman distance measure matrix.

Description

Computes a weighted Pearson distance measure matrix. If ranks are used this measure turns into weighted Spearman distance measure matrix.

Usage

wCorDist(x, w, useRanks, n_cores)

Arguments

x	input with columns containing each observation
w	weights for all values in a obervation
useRanks	indicates if Pearson should be computed on weighted ranks.
n_cores	number of cores to use for parallel computation.

Value

weighted Pearson distance measure matrix. If ranks are used this measure turns into weighted Spearman distance measure matrix.

khazum/ccImpute documentation built on Nov. 28, 2022, 7:27 a.m.