khembach/DISCERNS: DISCovery of unannotated Exons from RNa-seq Splice junction reads
The DISCERNS package predicts novel exons from RNA-seq data based on the SJ.out.tab and the BAM file from STAR. The mapped splice-junctions are compared with the genome annotation to discover novel exons. Existing genome annotations in GTF format can be extended with predicted exons.
Getting started
Browse package contents
Package details |
|
|---|---|
| Author | Katharina M. Hembach |
| Maintainer | Katharina M. Hembach <katharina.hembach@uzh.ch> |
| License | GPL (>=2) |
| Version | 0.99.0 |
| URL | https://github.com/khembach/DISCERNS |
| Package repository | View on GitHub |
| Installation |
Install the latest version of this package by entering the following in R:
|
