match_sj_in_intron: Match novel splice junctions within an intron

In khembach/DISCERNS: DISCovery of unannotated Exons from RNa-seq Splice junction reads

Description

Match novel splice junctions within an intron

Usage

match_sj_in_intron(s, e)

Arguments

s	GRanges object. Junctions from the start of the intron.
e	GRanges object. Junctions from the end of the intron.

Value

A vector with the seqnames, end of the preceding exon, start of the novel exon, end of the novel exon, start of the consecutive exon, and the strand.

khembach/DISCERNS documentation built on June 23, 2020, 3:35 p.m.