Files in kintany/GTExR
Package for GTEx analysis with R scripts

.DS_Store
.Rbuildignore
.gitignore
DESCRIPTION
GTExR.Rproj
NAMESPACE
R/.DS_Store
R/analysis_per_tissue.R R/analyze_NPCs.R R/getAI_Data.R R/get_tissue_counts.R R/loadGtexData.R R/plotCV2_vs_mean.R R/runForTissue.R R/utils.R
man/.DS_Store
man/aggregate_counts.Rd man/analyze_NPC_pulled_clones.Rd man/analyze_NPC_var.Rd man/analyze_imbalance_vs_counts.Rd man/analyze_rin.Rd man/analyze_sd_MAE_BAE.Rd man/analyze_sd_by_threshold.Rd man/analyze_sd_for_tissues.Rd man/compare_high_vs_low_samples.Rd man/compare_same_ind_diff_tissues.Rd man/generatePlots.Rd man/get_ASE_files_list.Rd man/get_classification.Rd man/get_counts_for_sample.Rd man/get_counts_statistics.Rd man/get_full_name.Rd man/get_individuals_subset.Rd man/get_ratio_sd.Rd man/get_ratios_sample.Rd man/get_rin_correlations_for_tissues.Rd man/get_samples_tissues.Rd man/get_sd_ratios.Rd man/get_short_name.Rd man/get_tissue_code.Rd man/list_of_samples_with_ratios.Rd man/load_Gtex_data.Rd man/load_counts.Rd man/make_plot_for_NPC.Rd man/measure.Rd man/plot_CV2_vs_mean.Rd man/plot_density_ratio_per_individual.Rd man/plot_density_ratio_per_individual_all_tissues.Rd man/plot_one.Rd man/plot_two.Rd man/process_to_counts.Rd man/read_counts.Rd man/read_counts_and_calc_ratios.Rd man/read_counts_and_merge_samples.Rd man/read_ratios.Rd man/save_Gtex_data_by_tissue.Rd man/save_counts.Rd man/save_counts_tissues_of_interest.Rd man/save_ratios.Rd man/save_ratios_tissues_of_interest.Rd man/simulate_ratios.Rd man/subsetGtexData.Rd man/subset_and_get_ratio.Rd man/variation_analysis_for_subset.Rd man/zscores_heatmap.Rd
kintany/GTExR documentation built on July 21, 2018, 7:48 p.m.