plot_CV2_vs_mean: Plots CV2 versus mean

Description Usage Arguments Value

View source: R/plotCV2_vs_mean.R

Description

Plots CV2 versus mean

Usage

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plot_CV2_vs_mean(df, name,
  path_fig = "/Users/svetlana/Dropbox (Partners HealthCare)/variation_project/GTEx/GTExR/results/Figures/CV2_mean/",
  n_bins = 5, plotMode = "Both", modeBoxPlot = "None")

Arguments

df

dataframe with statistics

name

tissue name

path_fig

path to save figures

n_bins

number of bins for mean expression

plotMode

"Both" or "Boxplots" or "Scatterplot" or "Merged" (merge boxplot and sctterplot into one plot)

modeBoxPlot

"None", "Ranges" (bin ranges will be added to boxplots), "Sizes" (sample sizes will be added to the plot) or "Pvals" (pvalues will be added to boxplots)

Value

ggplot


kintany/GTExR documentation built on July 21, 2018, 7:48 p.m.