Description Usage Arguments Value
Plots CV2 versus mean
1 2 3 | plot_CV2_vs_mean(df, name,
path_fig = "/Users/svetlana/Dropbox (Partners HealthCare)/variation_project/GTEx/GTExR/results/Figures/CV2_mean/",
n_bins = 5, plotMode = "Both", modeBoxPlot = "None")
|
df |
dataframe with statistics |
name |
tissue name |
path_fig |
path to save figures |
n_bins |
number of bins for mean expression |
plotMode |
"Both" or "Boxplots" or "Scatterplot" or "Merged" (merge boxplot and sctterplot into one plot) |
modeBoxPlot |
"None", "Ranges" (bin ranges will be added to boxplots), "Sizes" (sample sizes will be added to the plot) or "Pvals" (pvalues will be added to boxplots) |
ggplot
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