getOverlappingTargets: Get proportions of overlapping targets between all possible...

In komalsrathi/miRNAEnrich: Enrichment of miRNA

Usage

getOverlappingTargets(processors, db, mir.fam)

Arguments

processors
db
mir.fam

Examples

##---- Should be DIRECTLY executable !! ----
##-- ==>  Define data, use random,
##--	or do  help(data=index)  for the standard data sets.

## The function is currently defined as
function (processors, db, mir.fam) 
{
    require("doMC")
    require("plyr")
    require("data.table")
    registerDoMC(cores = processors)
    table = makeTable(db = db)
    res = ddply(.data = table, .variables = .(mir1, mir2), .fun = function(x) getTargets(table = x, 
        db = db, mir.fam = mir.fam), .parallel = T)
    return(res)
  }

komalsrathi/miRNAEnrich documentation built on May 20, 2019, 12:55 p.m.