addmiRNAToLimma: adds miRNA information to limma output

In komalsrathi/miRNAEnrich: Enrichment of miRNA

Usage

addmiRNAToLimma(foreground, db)

Arguments

foreground
db

Examples

##---- Should be DIRECTLY executable !! ----
##-- ==>  Define data, use random,
##--	or do  help(data=index)  for the standard data sets.

## The function is currently defined as
function (foreground, db) 
{
    foreground = merge(foreground, db[, c(2, 5)], by.x = "Symbol", 
        by.y = "Gene.Symbol", all.x = TRUE)
    foreground = aggregate(miRNA ~ ., foreground, toString)
    foreground$miRNA <- vapply(foreground$miRNA, paste, collapse = ", ", 
        character(1L))
    return(foreground)
  }

komalsrathi/miRNAEnrich documentation built on May 20, 2019, 12:55 p.m.