Man pages for kroemerlab/GRMeta
Processing MetX data
| aggregCEF | Agreggating CEF files |
| AnnotationDB | Annotation database |
| AnnotFluxGC | Annotation data for GC fluxomics |
| cleanMetaboNames | Clean analyte names |
| compSetRatios | Compute metabolite ratios |
| compSetSBR | Add SBR matrix to the experiment data object |
| compSetStats | Compute sample statistics |
| corrSetQC | Compute QC adjusted matrices |
| deleteEntries | Remove entries from a metaboSet object |
| exportSetXLSX | Export object to Xlsx |
| gatherMultiEICs | Fetch EICs from multiple sample files into one file |
| GRdesc | Annotation database descriptor |
| GRMeta-package | GRMeta |
| IPDB | Annotation database |
| loadAgilentData | Load Agilent data text files |
| loadAgilentDataFlux | Load Agilent data text files |
| loadMavenData | Load MAVEN targetted data files |
| loadSciexData | Load Sciex data text files |
| mapSetKegg | Create KEGG map from object |
| matchmzSet | Matching m/z to a database |
| mergeSet | Merge data from the same method or different methods |
| paramsParsing | Default parameters for parsing Agilent text files |
| parseSampEIC | Parse MS raw datafile to extract EICs |
| partitionPeaks | Partition peak list |
| plot.metaboSet | Plot analyte data from a metaboSet object |
| plotSetMEic | Plot series of Eics |
| PutMetDB | Database of molecular formula |
| RatiosGR | Annotation database of ratios |
| sortEntries | Reorder metaboSet object entries |
| stdDB | Database of standards |
| Undocumented | Undocumented functions |
| update.metaboSet | Update ids in a metaboSet object |
