cleanMetaboNames: Clean analyte names

In kroemerlab/GRMeta: Processing MetX data

Description

Clean analyte names

Usage

cleanMetaboNames(metnam, RegExpr = NULL, Syno = NULL)

Arguments

metnam	Vector of characters
RegExpr	Data frame used to sequentially rename metabolite names based on regular expression - If NA load default dictRegExpr file
Syno	Data frame used to sequentially rename metabolite names by exact matching - If NA load default dictSyno file

Value

Vector of characters

Author(s)

David Enot [e-mail]

Examples

### Default dictionaries
cleanMetaboNames(metnam = c("Beta.glucose","ACETYLCOA POS","ACETYLCOA PS"),RegExpr=NA,Syno=NA)
cleanMetaboNames(metnam = c("Beta.glucose","ACETYLCOA POS","ACETYLCOA PS"))
### Do not replace
cleanMetaboNames(metnam = c("Beta.glucose","ACETYLCOA POS","ACETYLCOA PS"),RegExpr=NULL,Syno=NULL)

kroemerlab/GRMeta documentation built on March 25, 2020, 11:32 a.m.