OmicSelector_vulcano_plot: OmicSelector_vulcano_plot

In kstawiski/OmicSelector: OmicSelector - a package for biomarker selection based on high-throughput experiments.

OmicSelector_vulcano_plot

Description

Draw vulcano plot of selected miRNAs.

Usage

OmicSelector_vulcano_plot(
  selected_miRNAs,
  DE = OmicSelector_differential_expression_ttest(),
  only_label = NULL,
  take_adjusted_p = FALSE
)

Arguments

selected_miRNAs	Vector of selected miRNAs.
DE	Differential expression to get the values from. It can be generated by 'OmicSelector_differential_expression_ttest()' or 'OmicSelector_best_signature_de()'
only_label	If NULL - all selected miRNAs will be labeled. If you want to label only selected miRNAs provide a character vector with their names.
take_adjusted_p	If take adjusted p-value using BH method. Default: false

Value

Vulcano plot.

kstawiski/OmicSelector documentation built on April 10, 2024, 11:11 p.m.