across: across

In kueckelj/SPATA: A Toolbox for Spatial Gene Expression Analysis

across

Description

across

Usage

across(across, across_subset)

Arguments

across

Character value. The name of the discrete feature-variable of interest. Hint: Character- or factor- variables are discrete variables. These functionally assign the barcode spots to distinct groups or clusters (e.g. segment or seurat_clusters) whoose properties you might want to compare against each other. Use getFeatureNames() to get an overview of the features variables your spata-object contains.

across_subset

Character vector or NULL. Specify the particular groups or clusters of interest the feature-variable specified in argument across contains. If set to NULL all of them are chosen. Hint: Use getFeatureValues() to obtain all available groups of a certain feature-variable.

kueckelj/SPATA documentation built on March 22, 2022, 9:59 p.m.