hlpr_smooth: Smooth variables spatially

In kueckelj/SPATA2: A Toolbox for Spatial Gene Expression Analysis

Smooth variables spatially

Description

Helper function to be used within purrr::imap()

Usage

hlpr_smooth(
  variable,
  var_name,
  coords_df,
  smooth_span,
  aspect,
  subset,
  pb = NULL
)

Arguments

variable	The variable to smooth
var_name	Name of the variable to smooth
coords_df	Data.frame that contains x and y coordinates
smooth_span	Span to smooth with
aspect	Gene or Gene set
subset	Vector of variable names to smooth
pb	A progress-bar or NULL.

Value

Smoothed variable (data.frame within purrr::imap())

kueckelj/SPATA2 documentation built on March 16, 2024, 10:25 a.m.