addDimRedData: Add dimensional reduction data

In kueckelj/celltracer: An Analysis-Toolbox for High-Throughput Cell Imaging Data

Description

This function allows to add dimensional reduction data to the object that can be referred to e.g. in plotDimRed().

Usage

addDimRedData(object, dim_red_df, dim_red_method)

Arguments

object	A valid cell tracer object.
dim_red_df	A data.frame that contains at least two variables: cell_id Character. The cells ids that are used to join the cluster variable unambiguously x Numeric. The cell id's position on the x-axis. y Numeric. The cell id's position on the y-axis.
dim_red_method	Character value. The dimensional reduction method.

Value

An updated cell tracer object that contains the data added.

kueckelj/celltracer documentation built on June 2, 2021, 6:37 a.m.