getGroupingOptions: Obtain variable names that group the cells

In kueckelj/celltracer: An Analysis-Toolbox for High-Throughput Cell Imaging Data

Description

This function returns the names of the variables that group cell ids and can therefore be used as input for the across argument.

Usage

getGroupingOptions(object, phase = "first_tmt")

getAcrossOptions(object, phase = "first_tmt")

Arguments

object	A valid cell tracer object.
phase	Character value. Refers to the phase of the experiment. Valid inputs are: 'before_tmt' Uses the data that refers to the time before the treatment. 'first_tmt' Uses the data that refers tot the time after the treatment. Note: This argument is ignored if the experiment set up did not include any treatment or the treatment started right from the beginning.

Value

An informative list.

kueckelj/celltracer documentation built on June 2, 2021, 6:37 a.m.