getPamObject: Obtain pam-clustering results.

In kueckelj/celltracer: An Analysis-Toolbox for High-Throughput Cell Imaging Data

Description

Obtain pam-clustering results.

Usage

getPamObject(object, k, phase = "first_tmt")

Arguments

object	A valid cell tracer object.
k	Numeric value. The k-value for which the pam-object of interest has been computed.
phase	Character value. Refers to the phase of the experiment. Valid inputs are: 'before_tmt' Uses the data that refers to the time before the treatment. 'first_tmt' Uses the data that refers tot the time after the treatment. Note: This argument is ignored if the experiment set up did not include any treatment or the treatment started right from the beginning.

Value

A pam object - the return value of the function cluster::pam() that has been computed via the function doPamClustering().

kueckelj/celltracer documentation built on June 2, 2021, 6:37 a.m.