callMesh: Retrieve Mesh from PubChem
In kwanjeeraw/metabox: metabox
Description
Usage
Arguments
Value
Author(s)
Examples
Description
retrieve Mesh terms for a given PubChem CID from PubChem
Usage
1
callMesh(pcid)
Arguments
pcid
a string of PubChem CID
Value
list of data frame of nodes and data frame of edges with the following components:
nodes:
id = mesh id
gid = mesh id
nodename = mesh name
nodelabel = Mesh
nodexref = mesh id
annotation_size = total number of PubChem CIDs in each Mesh term
background_size = total number of PubChem CIDs
edges:
source, target = node
type = ANNOTATION
datasource = PUBCHEM
Return empty list of data frame if error or found nothing.
Author(s)
Kwanjeera W kwanich@ucdavis.edu
Examples
1
# mesh = callMesh(345)
kwanjeeraw/metabox documentation built on May 20, 2019, 7:07 p.m.
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Description Usage Arguments Value Author(s) Examples
Description
retrieve Mesh terms for a given PubChem CID from PubChem
Usage
1 | callMesh(pcid)
|
Arguments
pcid |
a string of PubChem CID |
Value
list of data frame of nodes and data frame of edges with the following components:
nodes:
id = mesh id
gid = mesh id
nodename = mesh name
nodelabel = Mesh
nodexref = mesh id
annotation_size = total number of PubChem CIDs in each Mesh term
background_size = total number of PubChem CIDs
edges:
source, target = node
type = ANNOTATION
datasource = PUBCHEM
Return empty list of data frame if error or found nothing.
Author(s)
Kwanjeera W kwanich@ucdavis.edu
Examples
1 | # mesh = callMesh(345)
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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