Files in kwanjeeraw/metabox
metabox
.Rbuildignore
.gitignore
DESCRIPTION
LICENSE
NAMESPACE
R/PCA_Data_Exploration.R
R/PCA_plot.R
R/callBionet.R
R/callHypergeo.R
R/callMesh.R
R/callWordCloud.R
R/check_get_packages.R
R/combineNetworks.R
R/combinePvals.R
R/computeCorrelation.R
R/computeEnrichment.R
R/computeNodeEnrichment.R
R/computeNodeOverrep.R
R/computeNodeWordCloud.R
R/computeNwEnrichment.R
R/computeNwOverrep.R
R/computeNwWordCloud.R
R/computeParCorrelation.R
R/computeSimilarity.R
R/computeSubnetwork.R
R/convertId.R
R/createMeshTree.R
R/curlRequest.R
R/cypher.R
R/fetchHetNetwork.R
R/fetchHetNetworkByGID.R
R/fetchNetwork.R
R/fetchNetworkByGID.R
R/fetchNode.R
R/fetchRelationship.R
R/formatNetworkOutput.R
R/formatNodeOutput.R
R/formatPathOutput.R
R/getChemSimNet.R
R/getGraphDb.R
R/gg_color_hue.R
R/guess_factor.R
R/hello.R
R/histo.R
R/hypo_test.R
R/internalFormat.R
R/libs.R
R/load_aggregated_data.R
R/load_expression_data.R
R/load_feature_data.R
R/load_phenotype_data.R
R/messages.txt
R/plotWordCloud.R
R/readInfile.R
R/runGUI.R
R/setGraphDb.R
R/stat rm_outlier.R
R/stat_ANOVA_power.R
R/stat_BatchMedianNorm.R
R/stat_Boxplot_generator.R
R/stat_Donut_plot.R
R/stat_LoessNorm.R
R/stat_PCA_plot.R
R/stat_QC_RSD.R
R/stat_Study_Design.R
R/stat_auto_scale.R
R/stat_basic_statistics.R
R/stat_boxplot.R
R/stat_check_hypo_test.R
R/stat_combine_vector_1by1.R
R/stat_cross_merge_vectors.R
R/stat_cure_Dunn_format.R
R/stat_data_scaling.R
R/stat_data_transformation.R
R/stat_delete_result_column.R
R/stat_friedman_test_with_post_hoc.R
R/stat_get_index_from_PCA.R
R/stat_get_levels.R
R/stat_get_modified_data.R
R/stat_guess_factor.R
R/stat_hypo_test.R
R/stat_load_data.R
R/stat_log.R
R/stat_mTIC.R
R/stat_medFC.R
R/stat_median_correction.R
R/stat_mixed_ANOVA_power.R
R/stat_norm.R
R/stat_one_way_ANOVA.R
R/stat_one_way_repeated_ANOVA.R
R/stat_paired_t_test.R
R/stat_paired_t_test_power.R
R/stat_pareto_scale.R
R/stat_power.R
R/stat_range_scale.R
R/stat_repeated_ANOVA_power.R
R/stat_rm_sample.R
R/stat_sample_norm.R
R/stat_summary_data.R
R/stat_t_test.R
R/stat_t_test_power.R
R/stat_test_boxplot.R
R/stat_test_outlier.R
R/stat_two_way_ANOVA_power.R
R/summary_aggregated_data.R
R/test.R
R/testing.R
README.md
bug logs.txt
colnames.json
data/HEPATOCYTE.RData
data/MESH.RData
data/NEO4J.RData
data/initial.RData
data/mixed ANOVA/mx 255530 Jan Schilling_Project 1_ mouse serum_04-2016_submit_4.29.2016.xlsx
data/mixed ANOVA/mx 69088_HepG2 cells_Hirahatake & Meissen_high fructose_summer course_08-2015_submit.xlsx
data/mx 255530 Jan Schilling_Project 1_ mouse serum_04-2016_submit_4.29.2016.xlsx
data/mx 69088_HepG2 cells_Hirahatake & Meissen_high fructose_summer course_08-2015_submit.xlsx
data/one way ANOVA/mx 69088_HepG2 cells_Hirahatake & Meissen_high fructose_summer course_08-2015_submit.xlsx
data/one way repeated ANOVA/mx 69088_HepG2 cells_Hirahatake & Meissen_high fructose_summer course_08-2015_submit.xlsx
data/two independent group/mx_274941_Francisco Portell_human cells_06-2016_submit.xlsx
data/two independent group/with warning.xlsx
data/two paired group/mx_274941_Francisco Portell_human cells_06-2016_submit.xlsx
data/two way ANOVA/mx 255530 Jan Schilling_Project 1_ mouse serum_04-2016_submit_4.29.2016.xlsx
data/two way ANOVA/mx 69088_HepG2 cells_Hirahatake & Meissen_high fructose_summer course_08-2015_submit.xlsx
data/two way repeated ANOVA/mx 255530 Jan Schilling_Project 1_ mouse serum_04-2016_submit_4.29.2016.xlsx
data/two way repeated ANOVA/mx 69088_HepG2 cells_Hirahatake & Meissen_high fructose_summer course_08-2015_submit.xlsx
docker/Dockerfile
docker/R.install
docker/server.conf
inst/mETABOX/LICENSE
inst/mETABOX/R/format data.R
inst/mETABOX/R/general function.R
inst/mETABOX/R/libs.R
inst/mETABOX/cytoscapePie.R
inst/mETABOX/cytoscapePlot.R
inst/mETABOX/enrichmentAnalyzer.R
inst/mETABOX/formatOutTable.R
inst/mETABOX/global.R
inst/mETABOX/plotlyNetwork.R
inst/mETABOX/server.R
inst/mETABOX/ui.R
inst/mETABOX/www/cytoscape.js-2.5.3/LICENSE
inst/mETABOX/www/cytoscape.js-2.5.3/cytoscape.js
inst/mETABOX/www/cytoscape.js-2.5.3/cytoscape.js.map
inst/mETABOX/www/cytoscape.js-2.5.3/cytoscape.min.js
inst/mETABOX/www/cytoscape.js-2.5.3/cytoscape.min.js.map
inst/mETABOX/www/favicon.ico
inst/mETABOX/www/legend.png
inst/mETABOX/www/list.png
inst/mETABOX/www/logo.png
inst/mETABOX/www/mETABOX.css
inst/mETABOX/www/quantify.png
inst/mETABOX/www/stat.png
inst/mETABOX/www/style.css
inst/swf/copy_csv_xls.swf
inst/swf/copy_csv_xls_pdf.swf
inst/www/bootstrap/css/DataTables-1.10.12/images/sort_asc.png
inst/www/bootstrap/css/DataTables-1.10.12/images/sort_asc_disabled.png
inst/www/bootstrap/css/DataTables-1.10.12/images/sort_both.png
inst/www/bootstrap/css/DataTables-1.10.12/images/sort_desc.png
inst/www/bootstrap/css/DataTables-1.10.12/images/sort_desc_disabled.png
inst/www/bootstrap/css/bootstrap-editable.css
inst/www/bootstrap/css/bootstrap-select.min.css
inst/www/bootstrap/css/bootstrap.css
inst/www/bootstrap/css/bootstrap.min.css
inst/www/bootstrap/css/bootstrap2-toggle.min.css
inst/www/bootstrap/css/buttons.bootstrap.css
inst/www/bootstrap/css/buttons.bootstrap4.css
inst/www/bootstrap/css/buttons.dataTables.css
inst/www/bootstrap/css/buttons.foundation.css
inst/www/bootstrap/css/buttons.jqueryui.css
inst/www/bootstrap/css/buttons.semanticui.css
inst/www/bootstrap/css/dataTables.tableTools.css
inst/www/bootstrap/css/datatables.min.css
inst/www/bootstrap/css/editor.dataTables.css
inst/www/bootstrap/css/jquery.dataTables.min.css
inst/www/bootstrap/css/jquery.spin.css
inst/www/bootstrap/css/mETABOX.css
inst/www/bootstrap/css/morris.css
inst/www/bootstrap/css/sb-admin-2.css
inst/www/bootstrap/css/sb-admin.css
inst/www/bootstrap/css/select.bootstrap.css
inst/www/bootstrap/css/select.bootstrap4.css
inst/www/bootstrap/css/select.dataTables.css
inst/www/bootstrap/css/select.foundation.css
inst/www/bootstrap/css/select.jqueryui.css
inst/www/bootstrap/css/select.semanticui.css
inst/www/bootstrap/css/stat_analysis.css
inst/www/bootstrap/font-awesome/css/font-awesome.css
inst/www/bootstrap/font-awesome/css/font-awesome.min.css
inst/www/bootstrap/font-awesome/fonts/FontAwesome.otf
inst/www/bootstrap/font-awesome/fonts/fontawesome-webfont.eot
inst/www/bootstrap/font-awesome/fonts/fontawesome-webfont.svg
inst/www/bootstrap/font-awesome/fonts/fontawesome-webfont.ttf
inst/www/bootstrap/font-awesome/fonts/fontawesome-webfont.woff
inst/www/bootstrap/font-awesome/less/bordered-pulled.less
inst/www/bootstrap/font-awesome/less/core.less
inst/www/bootstrap/font-awesome/less/fixed-width.less
inst/www/bootstrap/font-awesome/less/font-awesome.less
inst/www/bootstrap/font-awesome/less/icons.less
inst/www/bootstrap/font-awesome/less/larger.less
inst/www/bootstrap/font-awesome/less/list.less
inst/www/bootstrap/font-awesome/less/mixins.less
inst/www/bootstrap/font-awesome/less/path.less
inst/www/bootstrap/font-awesome/less/rotated-flipped.less
inst/www/bootstrap/font-awesome/less/spinning.less
inst/www/bootstrap/font-awesome/less/stacked.less
inst/www/bootstrap/font-awesome/less/variables.less
inst/www/bootstrap/font-awesome/scss/_bordered-pulled.scss
inst/www/bootstrap/font-awesome/scss/_core.scss
inst/www/bootstrap/font-awesome/scss/_fixed-width.scss
inst/www/bootstrap/font-awesome/scss/_icons.scss
inst/www/bootstrap/font-awesome/scss/_larger.scss
inst/www/bootstrap/font-awesome/scss/_list.scss
inst/www/bootstrap/font-awesome/scss/_mixins.scss
inst/www/bootstrap/font-awesome/scss/_path.scss
inst/www/bootstrap/font-awesome/scss/_rotated-flipped.scss
inst/www/bootstrap/font-awesome/scss/_spinning.scss
inst/www/bootstrap/font-awesome/scss/_stacked.scss
inst/www/bootstrap/font-awesome/scss/_variables.scss
inst/www/bootstrap/font-awesome/scss/font-awesome.scss
inst/www/bootstrap/fonts/glyphicons-halflings-regular.eot
inst/www/bootstrap/fonts/glyphicons-halflings-regular.svg
inst/www/bootstrap/fonts/glyphicons-halflings-regular.ttf
inst/www/bootstrap/fonts/glyphicons-halflings-regular.woff
inst/www/bootstrap/fonts/glyphicons-halflings-regular.woff2
inst/www/bootstrap/images/Sorting icons.psd
inst/www/bootstrap/images/loader.gif
inst/www/bootstrap/images/loaderText.gif
inst/www/bootstrap/images/sort_asc.png
inst/www/bootstrap/images/sort_asc_disabled.png
inst/www/bootstrap/images/sort_both.png
inst/www/bootstrap/images/sort_desc.png
inst/www/bootstrap/images/sort_desc_disabled.png
inst/www/bootstrap/images/zoom.png
inst/www/bootstrap/img/clear.png
inst/www/bootstrap/img/loading.gif
inst/www/bootstrap/js/bootstrap-select.js
inst/www/bootstrap/js/bootstrap.js
inst/www/bootstrap/js/bootstrap.min.js
inst/www/bootstrap/js/bootstrap2-toggle.min.js
inst/www/bootstrap/js/jquery.js
inst/www/bootstrap/js/morris.min.js
inst/www/bootstrap/js/plugins/flot/excanvas.min.js
inst/www/bootstrap/js/plugins/flot/flot-data.js
inst/www/bootstrap/js/plugins/flot/jquery.flot.js
inst/www/bootstrap/js/plugins/flot/jquery.flot.pie.js
inst/www/bootstrap/js/plugins/flot/jquery.flot.resize.js
inst/www/bootstrap/js/plugins/flot/jquery.flot.tooltip.min.js
inst/www/bootstrap/js/plugins/morris/morris-data.js
inst/www/bootstrap/js/plugins/morris/morris.js
inst/www/bootstrap/js/plugins/morris/morris.min.js
inst/www/bootstrap/js/plugins/morris/raphael.min.js
inst/www/bootstrap/js/raphael-min.js
inst/www/convertid.html
inst/www/corr.html
inst/www/cytoscape/LICENSE
inst/www/cytoscape/cytoscape.min.js
inst/www/cytoscape/cytoscape.min.js.map
inst/www/dataexplore.html
inst/www/enrichanalysis.html
inst/www/enrichment.html
inst/www/enrichmentnsess.html
inst/www/enrichmentrsess.html
inst/www/figure/unnamed-chunk-1-1.png
inst/www/figure/unnamed-chunk-2-1.png
inst/www/hetnetwork.html
inst/www/image/corr_legend.png
inst/www/image/dbschema.png
inst/www/image/favicon.ico
inst/www/image/legend.png
inst/www/image/list.png
inst/www/image/logo.png
inst/www/image/par_legend.png
inst/www/image/quantify.png
inst/www/image/sim_legend.png
inst/www/image/stat.png
inst/www/index.html
inst/www/js/DataExploration.js
inst/www/js/bootbox.min.js
inst/www/js/bootstrap-editable.js
inst/www/js/buttons.bootstrap.js
inst/www/js/buttons.bootstrap4.js
inst/www/js/buttons.colVis.js
inst/www/js/buttons.flash.js
inst/www/js/buttons.foundation.js
inst/www/js/buttons.html5.js
inst/www/js/buttons.jqueryui.js
inst/www/js/buttons.print.js
inst/www/js/buttons.semanticui.js
inst/www/js/chroma.min.js
inst/www/js/d3Plots.js
inst/www/js/dataTables.buttons.js
inst/www/js/dataTables.editor.js
inst/www/js/dataTables.editor.min.js
inst/www/js/dataTables.select.js
inst/www/js/dataTables.tableTools.js
inst/www/js/datatables.min.js
inst/www/js/jquery-2.2.3.min.js
inst/www/js/jquery.csv.js
inst/www/js/jquery.dataTables.min.js
inst/www/js/jquery.zoom.min.js
inst/www/js/jszip.min.js
inst/www/js/mETABOX.js
inst/www/js/opencpu-0.5.js
inst/www/js/plotly-latest.min.js
inst/www/js/spin.js
inst/www/js/stat_FileSaver.min.js
inst/www/js/stat_analysis.js
inst/www/js/stat_analysis_editable_elements.js
inst/www/js/stat_analysis_functions.js
inst/www/js/stat_analysis_stat_method_option.js
inst/www/js/stat_canvas-toBlob.js
inst/www/js/watch.js
inst/www/nav.html
inst/www/overrepanalysis.html
inst/www/overreprsess.html
inst/www/parcorr.html
inst/www/plottree.html
inst/www/setgraphdb.html
inst/www/similarity.html
inst/www/similarityrsess.html
inst/www/simplenetwork.html
inst/www/stat_analysis.html
inst/www/subnetwork.html
inst/www/subnetworkrsess.html
inst/www/wordcloud.html
inst/www/wordcloudrsess.html
mETABOX.Rproj
man/Deal_with_outlier.Rd
man/PCA_Data_Exploration.Rd
man/PCA_plot.Rd
man/callBionet.Rd
man/callMesh.Rd
man/callWordCloud.Rd
man/check_get_packages.Rd
man/combineNetworks.Rd
man/combinePvals.Rd
man/computeCorrelation.Rd
man/computeEnrichment.Rd
man/computeNodeEnrichment.Rd
man/computeNodeOverrep.Rd
man/computeNodeWordCloud.Rd
man/computeNwEnrichment.Rd
man/computeNwOverrep.Rd
man/computeNwWordCloud.Rd
man/computeParCorrelation.Rd
man/computeSimilarity.Rd
man/computeSubnetwork.Rd
man/convertId.Rd
man/createMeshTree.Rd
man/curlRequest.Rd
man/fetchHetNetwork.Rd
man/fetchHetNetworkByGID.Rd
man/fetchNetwork.Rd
man/fetchNetworkByGID.Rd
man/fetchNode.Rd
man/fetchRelationship.Rd
man/formatNetworkOutput.Rd
man/formatNodeOutput.Rd
man/formatPathOutput.Rd
man/getDbInfo.Rd
man/getGraphDb.Rd
man/gg_color_hue.Rd
man/guess_factor.Rd
man/histo.Rd
man/hypo_test.Rd
man/load_aggregated_data.Rd
man/load_expression_data.Rd
man/load_feature_data.Rd
man/load_phenotype_data.Rd
man/plotWordCloud.Rd
man/readInfile.Rd
man/runGUI.Rd
man/setGraphDb.Rd
man/stat_ANOVA_power.Rd
man/stat_BatchMedianNorm.Rd
man/stat_Boxplot_generator.Rd
man/stat_Donut_plot.Rd
man/stat_LoessNorm.Rd
man/stat_PCA_plot.Rd
man/stat_QC_RSD.Rd
man/stat_Study_Design.Rd
man/stat_auto_scale.Rd
man/stat_basic_statistics.Rd
man/stat_boxplot.Rd
man/stat_check_hypo_test.Rd
man/stat_combine_vector_1by1.Rd
man/stat_cross_merge_vectors.Rd
man/stat_cure_Dunn_format.Rd
man/stat_data_scaling.Rd
man/stat_data_transformation.Rd
man/stat_delete_result_column.Rd
man/stat_friedman_test_with_post_hoc.Rd
man/stat_get_index_from_PCA.Rd
man/stat_get_levels.Rd
man/stat_get_modified_data.Rd
man/stat_guess_factor.Rd
man/stat_hypo_test.Rd
man/stat_load_data.Rd
man/stat_log.Rd
man/stat_mTIC.Rd
man/stat_medFC.Rd
man/stat_median_correction.Rd
man/stat_mixed_ANOVA_power.Rd
man/stat_norm.Rd
man/stat_one_way_ANOVA.Rd
man/stat_one_way_repeated_ANOVA.Rd
man/stat_paired_t_test.Rd
man/stat_paired_t_test_power.Rd
man/stat_pareto_scale.Rd
man/stat_power.Rd
man/stat_range_scale.Rd
man/stat_repeated_ANOVA_power.Rd
man/stat_rm_sample.Rd
man/stat_sample_norm.Rd
man/stat_summary_data.Rd
man/stat_t_test.Rd
man/stat_t_test_power.Rd
man/stat_test_boxplot.Rd
man/stat_test_outlier.Rd
man/stat_two_way_ANOVA_power.Rd
man/summary_aggregated_data.Rd
man/test.Rd
man/testing.Rd
messages.txt
messages_hypo_test.txt
