combineNetworks: Combine networks
In kwanjeeraw/metabox: metabox

Description Usage Arguments Value Author(s) See Also Examples

The function can combine networks computed from e.g. fetchNetwork, fetchHetNetwork, computeCorrelation, computeParCorrelation, and computeSimilarity.

1	combineNetworks(networks, returnas)

`networks`	list of networks. Each network contains data frame of nodes and data frame of edges.
`returnas`	a string specifying output type. It can be one of dataframe, list, json. Default is dataframe.

list of nodes and edges. Return empty list if error or found nothing.

Kwanjeera W kwanich@ucdavis.edu

fetchNetwork, fetchHetNetwork, computeCorrelation, computeParCorrelation, computeSimilarity

#simnw <- computeSimilarity(c(1110,10413,196,51,311,43,764,790)) #compute similarity network for given pubchem compounds
#dt <- data.frame(id=seq(32), mtcars, row.names = NULL) #data frame of x
#cornw <- computeCorrelation(x = dt, xtype = "compound", coef=0.9, pval = 1e-10) #compute correlation network
#result <- combineNetworks(list(simnw, cornw))

kwanjeeraw/metabox documentation built on May 20, 2019, 7:07 p.m.