Files in lachlanmcintosh/SAP
A SNP analysis pipeline
--no-save
.Rbuildignore
.gitignore
DESCRIPTION
NAMESPACE
R/BreakpointGRanges.R
R/StructuralVariantAnnotation.R
R/extensions-DataFrame.R
R/extensions-VCF.R
R/unittesthelper.R
R/util.R
R/vcfConstants.R
README.md
Rplots.pdf
SAP.Rproj
StructuralVariantAnnotation.Rproj
compare_arrays.R
inst/CITATION
inst/extdata/README
man/aggregateFunctionsFor.Rd
man/blastHomology.Rd
man/breakpointRanges.Rd
man/breakpointSequence.Rd
man/elementExtract.Rd
man/findBreakpointOverlaps.Rd
man/grapes-na-grapes.Rd
man/grapes-null-grapes.Rd
man/isStructural.Rd
man/isSymbolic.Rd
man/partner.Rd
man/referenceHomology.Rd
man/referenceSequence.Rd
man/transformFunctionsFor.Rd
man/unpack.Rd
na12878.R
non_parallel_anal.R
out
tests/testthat-StructuralVariantAnnotation.R
tests/testthat/test-BreakpointGRanges.R
tests/testthat/test-extensions-DataFrame.R
tests/testthat/test-extensions-VCF.R
tests/testthat/test-util.R
utils.R
