refineRegions: Refine regions
In lamortenera/epicseg: Chromatin Segmentation in R
Description
Usage
Arguments
Value
Description
Refine a GRanges object to make sure that it is compatible with a
binning scheme of a given binsize. There is more than one way of doing it.
In the way it is done here, the start coordinates and the end coordinates
of the provided regions will become respectively the next number of the form
binsize*k + 1 and the previous number of the form binsize*k,
so that the refined regions will always be contained in the original ones.
Usage
1
refineRegions(regions, binsize)
Arguments
regions
GRanges object containing the genomic regions of interest.
binsize
The size of each bin in basepairs.
Value
A GRanges object with the refined regions.
lamortenera/epicseg documentation built on May 20, 2019, 7:34 p.m.
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Description Usage Arguments Value
Description
Refine a GRanges object to make sure that it is compatible with a
binning scheme of a given binsize. There is more than one way of doing it.
In the way it is done here, the start coordinates and the end coordinates
of the provided regions will become respectively the next number of the form
binsize*k + 1 and the previous number of the form binsize*k,
so that the refined regions will always be contained in the original ones.
Usage
1 | refineRegions(regions, binsize)
|
Arguments
regions |
GRanges object containing the genomic regions of interest. |
binsize |
The size of each bin in basepairs. |
Value
A GRanges object with the refined regions.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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