Description Usage Arguments Details Value
Produce an html report of a segmentation
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segments |
GRanges or GRangesList object containing the segmentation.
If GRanges, the |
model |
A list with the complete set of the parameters that describe
the HMM, such as that returned by the |
outdir |
Output directory where the report will be created. |
prefix |
Prefix prepended to all output files. |
colors |
A character vector assigning one color per state. each color must be a valid R color. |
labels |
A character vector assigning one name per state |
annots |
Named list where each item is a GRanges object to be compared with the segmentation. |
rdata |
R objects that will be saved as Rdata archives and will be part of the report. |
autoColors |
a list with two fields that controls how
the colors are automatically assigned to each state. The value |
A web page will be created with plots linked to tables in text format.
The path to the newly created webpage
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