Description Usage Arguments Examples
View source: R/mle.getEncodingLength.r
This function calculates the mininmum encoding length associated with a subset of variables against a background knowledge graph.
1 | mle.getEncodingLength(ig, path, pvals, ptID)
|
ig |
- An igraph object of the background knowledge graph. |
path |
- The filepath to a directory you will store patient-specific RData files in. |
pvals |
- The matrix that gives the perturbation strength significance for all variables (columns) for each patient (rows) |
ptID |
- The row name in data.pvals corresponding to the patient you specifically want encoding information for. |
1 | mle.getEncodingLength(int patientNum, matrix data.pvals, int kmax)
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