mle.getPermutations: Generate the "adaptive walk" node permutations, starting from...

Description Usage Arguments Examples

View source: R/mle.getPermutations.r

Description

This function calculates the node permutation starting from a given perturbed variable in a subset of variables in the background knowledge graph.

Usage

1
mle.getPermutations(sig.nodes, patient, ig.pt)

Arguments

sig.nodes

- The names (as a character vector) of the variables that were significantly perturbed in the given patient.

patient

- The row number (integer) in data.pvals associated with the patient being processed.

ig.pt

- An igraph object of the background knowledge graph.

Examples

1
mle.getPermutations(sig.nodes, patient, ig.pt)

lashmore/MolEndoMatch documentation built on May 5, 2019, 8:02 p.m.