This package provides functions for annotation-agnostic differential expression analysis of RNA-seq data. Two implementations of the DER Finder approach are included in this package: (1) single base-level F-statistics and (2) DER identification at the expressed regions-level. The DER Finder approach can also be used to identify differentially bounded ChIP-seq peaks.
Package details |
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Bioconductor views | ChIPSeq Coverage DifferentialExpression DifferentialPeakCalling ImmunoOncology RNASeq Sequencing Software |
Maintainer | |
License | Artistic-2.0 |
Version | 1.39.0 |
URL | https://github.com/lcolladotor/derfinder |
Package repository | View on GitHub |
Installation |
Install the latest version of this package by entering the following in R:
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