derfinder-package: derfinder: Annotation-agnostic differential expression...

derfinder-packageR Documentation

derfinder: Annotation-agnostic differential expression analysis of RNA-seq data at base-pair resolution via the DER Finder approach


This package provides functions for annotation-agnostic differential expression analysis of RNA-seq data. Two implementations of the DER Finder approach are included in this package: (1) single base-level F-statistics and (2) DER identification at the expressed regions-level. The DER Finder approach can also be used to identify differentially bounded ChIP-seq peaks.


Maintainer: Leonardo Collado-Torres (ORCID)


Other contributors:

See Also

Useful links:

lcolladotor/derfinder documentation built on May 4, 2024, 5:38 p.m.